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ngff-zarr-mcp demo

The ngff-zarr-mcp Model Context Protocol (MCP) server converts datasets to the OME-Zarr scientific imaging data format, optimizes the compression codec, ensures a limited number of files are generated, and creates a Python script for re-use.

For more information, see ngff-zarr.

Prompts used

Convert LIDCFull.tif to OME-Zarr

Find the optimal codec to use for this data.

Use sharding to keep the number of files under 20.

Create a Python script to convert all files in a provided input directory to a provided output directory. Use the codec we found to be optimal.

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